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dokuwiki:jmol2

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Jmol2 plugin

Plugin for Jmol applet that displays 3D-molecular models.



:!: :!: :!: IMPORTANT NEWS FOR EXISTING JMOL USERS :!: :!: :!:
This is a partial rewrite of the Jmol plugin by Ikuo Obataya.
:!: :!: :!: IMPORTANT NEWS FOR EXISTING JMOL USERS :!: :!: :!:



Download and Installation

Download and install the plugin using the DokuWiki Plugin Manager using the URL given above. Refer to :DokuWiki Plugins on how to install plugins manually.

To see a demo online, visit here.

Note: If you do install manually the directory must be named jmol2.

Overview

The goal of this plugin was to provide a simple, ready to go system viewer for chemical structures in 3D. It also bundles the necessary java libraries (hence the 6.5Mb size) so that you should not need to do any configuration to get it up and running as quickly as possible. I haven't thoroughly tested this point on many platforms yet, so any feedback is welcome.

Features

  • Uses the Jmol JavaScript library, an open-source Java viewer for chemical structures in 3D.

Issues and Requests

This package uses a library maintained by someone else which is just focusing on use Jmol into DokuWiki content.

Version history

  • 2010-02-17 (current)
    first release

How to use

Use 'jmol' tag and put the filename of a 3D-molecular models file inside of it. You can set the size of applet and the background color, after the filename.

<jmol ({{namespace:molecule}}) (width) (height) (background)>
  ... Jmol scripts ...
</jmol>

....

<jmol>
  ... more Jmol scripts ...
</jmol>
dokuwiki/jmol2.txt · Ultima modifica: 10/05/2012 18:39 (modifica esterna)

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